PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Zpz_sc00315.1.g00300.1.sm.mk
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Chloridoideae; Zoysieae; Zoysiinae; Zoysia
Family ERF
Protein Properties Length: 204aa    MW: 21255.3 Da    PI: 9.5025
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Zpz_sc00315.1.g00300.1.sm.mkgenomeZGDView Nucleic Acid
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.42.1e-192070155
                           AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                                  ++++GVr ++ +gr++AeIrdp     r +r++lg+f+tae Aa+a++aa++ ++g
  Zpz_sc00315.1.g00300.1.sm.mk 20 PRFRGVRKRP-WGRYAAEIRDP---A-RkARVWLGTFDTAEAAARAYDAAALHFRG 70
                                  689*******.**********8...2.35***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.14E-192079No hitNo description
PfamPF008471.7E-132070IPR001471AP2/ERF domain
SMARTSM003809.6E-362184IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.2E-322178IPR001471AP2/ERF domain
PROSITE profilePS5103224.542178IPR001471AP2/ERF domain
SuperFamilySSF541712.88E-222179IPR016177DNA-binding domain
PRINTSPR003671.4E-102233IPR001471AP2/ERF domain
PRINTSPR003671.4E-104460IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 204 aa     Download sequence    Send to blast
MAPKTAPPPA AAVSDCMMEP RFRGVRKRPW GRYAAEIRDP ARKARVWLGT FDTAEAAARA  60
YDAAALHFRG PKAKTNFPVP YAQAKHALAP PKALAVSPSS STIESSSRES PVAAPAPASS  120
LDLSLGMPIV VAAQPFLFLD PRLAVTVAVP APAPLRPVAV AAHKAATYRD DEQSDTGSSS  180
SVVDASPAVG LGLDLNMPPP DEVA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A1e-202279664ATERF1
3gcc_A1e-202279664ATERF1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFP0933874e-72FP093387.1 Phyllostachys edulis cDNA clone: bphylf043h08, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_004976762.11e-79PREDICTED: ethylene-responsive transcription factor 4-like
TrEMBLA0A0A9VSD52e-79A0A0A9VSD5_ARUDO; Uncharacterized protein
TrEMBLK3Y7N72e-77K3Y7N7_SETIT; Uncharacterized protein
STRINGSi010228m5e-77(Setaria italica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118532537
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G44210.18e-23erf domain protein 9